BANDO FIRB 2012 PDF

Several important events are required for successful seed setting: the ovule primordia have to be formed, followed by pattern formation and. Second International Conference, TPDL , Paphos, Cyprus, September 27, gestione dei dati, analisi linguisticaā€¯ (Bando FIRB – Futuro in ricerca ) . Titolo: BANDO FIRB – PROGRAMMA “FUTURO IN RICERCA” Anno ” Realization of an innovative system for complex calculations and pattern recognition.

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Furthermore, the expected results will be the first step for technology transfer from model species to crops of high value such as Brassica napus.

Ricerca – Programma – Futuro in Ricerca

We will characterize the system proposed also in the context of the medical imaging. Several important events are required for successful seed setting: The number of seed that develop is one of the most important traits in plant breeding.

In addition, it will fib easy to adapt the system also to the high level triggers allowing to reduce the cost of the current PC farms for the online selection.

The main issues of such a proposal are the possibility to have a large bandwidth and a constant latency.

For example, this is the case for the real time reconstruction of medical images during the diagnostics or the clinic therapy. This, by exploiting the constant development of the electronic industry, reduces the cost and the construction time. We intend to deploy it as a trigger device in HEP experiments both at the first levels as a synchronous apparatus and at the higher levels as a powerful processor for complex algorithms. The deployment of FPGA and GPUs in the same system will allow to take complex decisions in the first levels of trigger of HEP experiments up to event rates of tens of MHz, not even imaginable with the standard techniques.

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This is possible thanks to the specific architecture of the GPUs which well adapts to parallelizable problems such as those of patter recognition. Our proposal is based on the deployment of graphics processing units GPU. The current scientific experiments require a constant improvement of the data acquisition and analysis systems.

I dati visualizzati non vando stati sottoposti a validazione da parte dell’ateneo.

In many cases it is essential to have a fast processing time for the data collected. In addition, there is an increasing demand for plant-derived products for non-food purposes, such nando energy production. I dati possono differire da quelli visualizzati in reportistica. This happens for example for big high energy physics experiments.

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This is typically achieved developing systems dedicated firn the specific application. I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione. We propose a project aimed at the developing of a novel system for realtime scientific applications. Scheda prodotto non validato Attenzione!

One aspect that is important for the control of ovule development but until now not studied, is the involvement of epigenetic regulation of gene expression. The possibility to effectively reduce 20122 rate of collected data with an online selection with similar performances than those obtained offline will reduce the requests on the bandwidth.

Particular attention figb be devoted to latency of the data transfer such as to ensure a total acceptable latency. Scheda breve Scheda completa Autori: This project aims to study the molecular network determining ovule numbers and fertility using Arabidopsis as a model.

We plan to understand 22012 epigenetic modifications correlate with the activity of CUC transcription factors in modulating gene expression needed for ovule primordia formation and development. The banso presented will be carried on in three years on by the three research units of INFN, the University of Ferrara, the University of Rome Sapienza; all scientists involved in this project have specific competencies in the proposed field.

Even though the trigger in HEP experiments and the reconstruction of medical images have important differences, they share the necessity for high computational power and reliability.

This species has been chosen because it is closely related to Arabidopsis and because genome sequence and mutant facilities are available for this species.

However, the recent development of the digital technology applied to consumer goods allows the cosntruction of innovative systems based on commercial solutions. In conclusion, we propose to demonstrate the feasibility of a system for the data acquisition and analysis in real time based on a creative use or emerging electronics technologies. The applied aspects of the proposed research are of interest for the agro-food and industrial sectors that will contribute to the technology transfer and to the exploitation of the results.

The project is built in a way that the two URs, with complementary and the necessary competences to approach such a complex and interesting process, will interact constantly to reach the expected scientific results and to guarantee an excellent training for young scientists. File in questo prodotto: The most innovative aspect of this project is probably the solution of complex problems with the GPUs. Milano and CNR-IBBR, Porticisuch as laser microscopy, genome wide histone marks identification, genome wide expression analysis, genome wide chromatin identification.

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Even though the data volume and the time scale in the two fields are very different, the above examples show how important the real time processing is. Aiuto Sfoglia Scorri i prodotti per: Autore Fitb Riviste Serie. The genetic networks controlling ovule number and fertility are strictly connected and a restricted number of master genes control these developmental processes, examples of this are for instance the CUC genes, which encode transcription factors.

The underlying idea of the project is to exploit the computational power of the modern graphics processor units for real time applications. Nevertheless it will be necessary baneo develop new methods to adapt specific application technology that has been design for very different goals.

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Utilizza questo identificativo per citare o creare un link a questo documento: The huge computational power of a single GPU is for such problems comparable with those of hundreds of standard processors CPU.

The girb goal is to identify CUC targets that will reveal the genetic network controlling this process and to identify genes that control ovule numbers in Arabidopsis. The objectives will be reached using an integrative approach using NGS approaches that are available in the two URs Univ. In such experiments it is necessary to keep the large flux of data on buffers while selective and fast algorithms are performed to identify the very few banro to store on disk.

Athda19 and Atmcc1 mutants in which the histone acetylation is increased have a phenotype similar to the one described for the cuc2 STK:: For data transmission we will study different solutions. Progetto di Ricerca Triennale – Genetic and epigenetic control of ovule number and fertility in Arabidopsis Several important events are required for successful seed setting: Yield enhancement is very important to meet increasing food demand. Clara Conicella Project Coordinator: